git: 1993bfc7cf7d - main - biology/samtools: Update to 1.17

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From: Jason W. Bacon <jwb_at_FreeBSD.org>
Date: Fri, 24 Feb 2023 23:31:47 UTC
The branch main has been updated by jwb:

URL: https://cgit.FreeBSD.org/ports/commit/?id=1993bfc7cf7d933c1a8cc11bf2198ce8691a0d76

commit 1993bfc7cf7d933c1a8cc11bf2198ce8691a0d76
Author:     Jason W. Bacon <jwb@FreeBSD.org>
AuthorDate: 2023-02-24 23:27:21 +0000
Commit:     Jason W. Bacon <jwb@FreeBSD.org>
CommitDate: 2023-02-24 23:27:21 +0000

    biology/samtools: Update to 1.17
    
    Numerous enhancements and bug fixes
    
    Changes: https://github.com/samtools/samtools/releases
    
    Reported by:    portscout
---
 biology/samtools/Makefile  | 2 +-
 biology/samtools/distinfo  | 6 +++---
 biology/samtools/pkg-plist | 2 ++
 3 files changed, 6 insertions(+), 4 deletions(-)

diff --git a/biology/samtools/Makefile b/biology/samtools/Makefile
index 64b06bff07e8..92da7c61eff7 100644
--- a/biology/samtools/Makefile
+++ b/biology/samtools/Makefile
@@ -1,5 +1,5 @@
 PORTNAME=	samtools
-DISTVERSION=	1.16.1
+DISTVERSION=	1.17
 CATEGORIES=	biology
 
 MAINTAINER=	jwb@FreeBSD.org
diff --git a/biology/samtools/distinfo b/biology/samtools/distinfo
index d0c7b4cbb765..55c01a4de639 100644
--- a/biology/samtools/distinfo
+++ b/biology/samtools/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1672094602
-SHA256 (samtools-samtools-1.16.1_GH0.tar.gz) = 70a7f358088929272d8c22d6063290ac8420f5351fba237a99fe17851a45d8be
-SIZE (samtools-samtools-1.16.1_GH0.tar.gz) = 4992787
+TIMESTAMP = 1677245969
+SHA256 (samtools-samtools-1.17_GH0.tar.gz) = f76ec1880468ecaa5341a7256ae896f2cfb191193dbb683046776fb81e18af49
+SIZE (samtools-samtools-1.17_GH0.tar.gz) = 5459752
diff --git a/biology/samtools/pkg-plist b/biology/samtools/pkg-plist
index 1d228254f042..15e146e410cd 100644
--- a/biology/samtools/pkg-plist
+++ b/biology/samtools/pkg-plist
@@ -29,6 +29,7 @@ man/man1/samtools-cat.1.gz
 man/man1/samtools-collate.1.gz
 man/man1/samtools-consensus.1.gz
 man/man1/samtools-coverage.1.gz
+man/man1/samtools-cram-size.1.gz
 man/man1/samtools-depad.1.gz
 man/man1/samtools-depth.1.gz
 man/man1/samtools-dict.1.gz
@@ -50,6 +51,7 @@ man/man1/samtools-phase.1.gz
 man/man1/samtools-quickcheck.1.gz
 man/man1/samtools-reference.1.gz
 man/man1/samtools-reheader.1.gz
+man/man1/samtools-reset.1.gz
 man/man1/samtools-rmdup.1.gz
 man/man1/samtools-samples.1.gz
 man/man1/samtools-sort.1.gz