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(8.16.1/8.16.1) with ESMTP id 24QK5MWN052601; Thu, 26 May 2022 20:05:22 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.16.1/8.16.1/Submit) id 24QK5Mgl052598; Thu, 26 May 2022 20:05:22 GMT (envelope-from git) Date: Thu, 26 May 2022 20:05:22 GMT Message-Id: <202205262005.24QK5Mgl052598@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Thierry Thomas Subject: git: d976ae7a5d39 - main - science/paraview: resurrect List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: thierry X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: d976ae7a5d3940906595c30b9745600bec27c0ec Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1653595522; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=eFBEIGL1iXiIF6uLml6fnRzQTMRQcDJnWu0qhparq64=; b=gehfTyJD4BISQgCJxWQtShyYcD0Zv2rXsr1qP5UKfFzj/27emHo+AYnFb60dYzZluBMmH/ fU97T9A9ER4UraMOQUE9PbdHcnSDdGwg0lU89Hz4rGRpjqi7yJs81KtNk3PjyNRx6NxOFa KPHAPMI/JQhJJjY8ksi0DBG6Iefo0a84J9h1yDnnorqtE8IM0hRVf+7//4/htqR/sfdA6T ssixOHqu55xS7x+yA4xwIr7Zj+r0L1N4bBYLETybUA5/9Ppq+1b5g1bm9cSl4Zf4K1Wq2k vXICatI1bYGBk5M7OKZmFfN0MuQb/BFISf66R1dj4jbASPbbelZksjpcDXLi4A== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1653595522; a=rsa-sha256; cv=none; b=muI5l0M4kVYSwjHVnOjSUT8FY+DUt9kvl+ZNwLcWND66wGEk04z/sJSn9eXyC56SaS9Jru A0PElxtZQK89mU1L/4bxk5geMBE13AsAT19zGlKljqmK2DC0W8WOYF3VlLiZLswCx9dqll hunE4k+5EFDmEKounHK0+kzDJ7YFzsLvH7RKR+drJWoHdtGlA2BFu+BuEDAO8RVR6tf7O9 MbW2fVrR7bb+zwABJmTOLvxquJNhJCqqP5uAzhS3D89Im0KQrtuju3A2KYk6cAQIUaZxSc R5Vi5YUDPDhb8oBDdyj7NzeJPaBvG+W/chX+RuiVVA4pzWNOCzHj+xVUyLuuBA== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by thierry: URL: https://cgit.FreeBSD.org/ports/commit/?id=d976ae7a5d3940906595c30b9745600bec27c0ec commit d976ae7a5d3940906595c30b9745600bec27c0ec Author: Thierry Thomas AuthorDate: 2022-05-23 20:04:15 +0000 Commit: Thierry Thomas CommitDate: 2022-05-26 20:04:49 +0000 science/paraview: resurrect It has been removed in r548980 because it used a deprecated version of Python, but this is fixed now. --- MOVED | 1 - science/Makefile | 1 + science/paraview/Makefile | 105 + science/paraview/distinfo | 3 + .../files/patch-CMake_ParaViewMacros.cmake | 12 + .../patch-CommandLineExecutables_CMakeLists.txt | 11 + ...ClientServerCore_Default_vtkPVFileInformation.h | 10 + ...wCore_VTKExtensions_Default_vtkPhastaReader.cxx | 11 + .../files/patch-Plugins_CDIReader_cdilib.c | 11 + science/paraview/files/patch-c83b583c.c | 22 + science/paraview/pkg-descr | 4 + science/paraview/pkg-plist | 2631 ++++++++++++++++++++ 12 files changed, 2821 insertions(+), 1 deletion(-) diff --git a/MOVED b/MOVED index 263494c9ffad..b5102f49fc08 100644 --- a/MOVED +++ b/MOVED @@ -15479,7 +15479,6 @@ news/rawdog||2020-09-19|Has expired: Uses deprecated version of python ports-mgmt/portell||2020-09-19|Has expired: Uses deprecated version of python print/biblio-py||2020-09-19|Has expired: Uses deprecated version of python science/brian||2020-09-19|Has expired: Uses deprecated version of python -science/paraview||2020-09-19|Has expired: Uses deprecated version of python security/arm||2020-09-19|Has expired: Uses deprecated version of python security/ismtp||2020-09-19|Has expired: Uses deprecated version of python security/py-halberd||2020-09-19|Has expired: Uses deprecated version of python diff --git a/science/Makefile b/science/Makefile index ec1bc1bf24bc..6433804ff343 100644 --- a/science/Makefile +++ b/science/Makefile @@ -234,6 +234,7 @@ SUBDIR += packmol SUBDIR += pagmo2 SUBDIR += paje + SUBDIR += paraview SUBDIR += pastix SUBDIR += pcmsolver SUBDIR += phonopy diff --git a/science/paraview/Makefile b/science/paraview/Makefile new file mode 100644 index 000000000000..d10b84370e5b --- /dev/null +++ b/science/paraview/Makefile @@ -0,0 +1,105 @@ +# Created by: anholt@FreeBSD.org +# $FreeBSD$ + +PORTNAME= paraview +DISTVERSION= 5.6.0 +PORTREVISION= 8 +CATEGORIES= science graphics +MASTER_SITES= http://www.paraview.org/files/v${VERMAJORMINOR}/ +DISTNAME= ParaView-v${PORTVERSION} + +MAINTAINER= devel@stasyan.com +COMMENT= Powerful scientific data visualization application + +LICENSE= ParaView_License_1.2 +LICENSE_NAME= ParaView_License +LICENSE_FILE= ${PATCH_WRKSRC}/License_v1.2.txt +LICENSE_PERMS= dist-mirror dist-sell pkg-mirror pkg-sell auto-accept + +DEPRECATED= Uses deprecated version of python +EXPIRATION_DATE= 2020-09-15 + +BUILD_DEPENDS= ${PYTHON_SITELIBDIR}/matplotlib/pyplot.py:math/py-matplotlib@${PY_FLAVOR} +LIB_DEPENDS= libhdf5.so:science/hdf5 \ + libpng.so:graphics/png \ + libtiff.so:graphics/tiff \ + libfreetype.so:print/freetype2 \ + libexpat.so:textproc/expat2 \ + libjbig.so:graphics/jbigkit \ + liborc-0.4.so:devel/orc \ + libpcre.so:devel/pcre \ + libffi.so:devel/libffi \ + libdrm.so:graphics/libdrm \ + libfontconfig.so:x11-fonts/fontconfig \ + libprotobuf.so:devel/protobuf +RUN_DEPENDS= bash:shells/bash \ + ${PYTHON_SITELIBDIR}/matplotlib/pyplot.py:math/py-matplotlib@${PY_FLAVOR} + +USES= alias cmake compiler:c11 gl jpeg localbase python:2.7 qt:5 \ + shebangfix xorg +USE_QT= core gui help network sql widgets x11extras xmlpatterns \ + buildtools_build qmake_build +USE_GL= gl glu +USE_XORG= x11 xt xext ice xdmcp xau xcb xfixes xdamage xxf86vm xrender sm xorgproto +USE_LDCONFIG= yes +USE_GSTREAMER= yes + +CONFLICTS_INSTALL= ${PYTHON_PKGNAMEPREFIX}pygments + +CMAKE_ARGS+= -DBUILD_SHARED_LIBS="ON" \ + -DVTK_USE_SYSTEM_PNG="ON" \ + -DVTK_USE_SYSTEM_JPEG="ON" \ + -DVTK_USE_SYSTEM_TIFF="ON" \ + -DVTK_USE_SYSTEM_ZLIB="ON" \ + -DVTK_USE_SYSTEM_FREETYPE="ON" \ + -DVTK_USE_SYSTEM_EXPAT="ON" \ + -DVTK_USE_SYSTEM_PROTOBUF="ON" \ + -DVTK_USE_X="ON" \ + -DVTK_HAVE_GETSOCKNAME_WITH_SOCKLEN_T=1 \ + -DPARAVIEW_ENABLE_PYTHON:BOOL="ON" \ + -DPARAVIEW_ENABLE_FFMPEG:BOOL="OFF" \ + -DBUILD_TESTING:BOOL="OFF" \ + -DExternalData_OBJECT_STORES="${WRKDIR}/VTK/ExternalData/MD5" \ + -DFREETYPE_INCLUDE_DIRS="${LOCALBASE}/include/freetype2" +MAKE_ENV= XDG_CONFIG_HOME=${WRKDIR} + +SHEBANG_FILES= Catalyst/catalyze.py VTK/Examples/SearchScript.sh \ + VTK/Utilities/Maintenance/*.sh + +OPTIONS_DEFINE= OSMESA GL2PS DOCS +OPTIONS_SUB= yes +OSMESA_DESC= Use Mesa for off-screen rendering +GL2PS_DESC= Install support conversion OpenGL to PostScript +# VTKMPEG2 "Install patented MPEG2 encoder module" Off \ + +VERMAJORMINOR= ${PORTVERSION:R} + +OSMESA_LIB_DEPENDS= libOSMesa.so:graphics/libosmesa +OSMESA_CMAKE_BOOL= VTK_OPENGL_HAS_OSMESA +OSMESA_CMAKE_ON= -DOSMESA_INCLUDE_DIR:PATH=${LOCALBASE}/include/Mesa \ + -DOSMESA_LIBRARY:FILEPATH=${LOCALBASE}/lib/libOSMesa.so + +GL2PS_LIB_DEPENDS= libgl2ps.so:print/gl2ps +GL2PS_CMAKE_BOOL= VTK_USE_GL2PS + +PLIST_SUB+= VERMAJORMINOR=${VERMAJORMINOR} +CMAKE2INST= ParaViewConfig.cmake \ + cmake_install.cmake +LIB_INSTDIR= ${PREFIX}/lib/${PORTNAME}-${VERMAJORMINOR} + +pre-configure: + @${REINPLACE_CMD} -e 's|png_set_gray_1_2_4_to_8|png_set_expand_gray_1_2_4_to_8|' \ + ${PATCH_WRKSRC}/VTK/IO/Image/vtkPNGReader.cxx + @${REINPLACE_CMD} -e 's|/bin/bash|${LOCALBASE}/bin/bash|' \ + ${PATCH_WRKSRC}/VTK/Utilities/Maintenance/vtk_site_history.py + +post-install: +.for c2f in ${CMAKE2INST} + ${SED} -e 's|${BUILD_WRKSRC}|${LIB_INSTDIR}|g' \ + -e 's|${PATCH_WRKSRC}|${LIB_INSTDIR}|g' \ + ${BUILD_WRKSRC}/${c2f} > ${STAGEDIR}${LIB_INSTDIR}/`${BASENAME} ${c2f}` +.endfor + ${INSTALL_DATA} ${PATCH_WRKSRC}/CMake/UseParaView.cmake \ + ${STAGEDIR}${PREFIX}/lib/${PORTNAME}-${VERMAJORMINOR} + +.include diff --git a/science/paraview/distinfo b/science/paraview/distinfo new file mode 100644 index 000000000000..1d37b5745511 --- /dev/null +++ b/science/paraview/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1547963430 +SHA256 (ParaView-v5.6.0.tar.gz) = cb8c4d752ad9805c74b4a08f8ae6e83402c3f11e38b274dba171b99bb6ac2460 +SIZE (ParaView-v5.6.0.tar.gz) = 54085457 diff --git a/science/paraview/files/patch-CMake_ParaViewMacros.cmake b/science/paraview/files/patch-CMake_ParaViewMacros.cmake new file mode 100644 index 000000000000..f107f593ca4c --- /dev/null +++ b/science/paraview/files/patch-CMake_ParaViewMacros.cmake @@ -0,0 +1,12 @@ +Prior to 3.12 cmake silently created an empty destination directory if the origin of the copy_directory does not exist. + +--- CMake/ParaViewMacros.cmake.orig 2018-07-20 20:59:05 UTC ++++ CMake/ParaViewMacros.cmake +@@ -382,6 +382,7 @@ function(build_help_project name) + set (copy_directory_command + # copy all htmls from source to destination directory (same location where the + # qhp file is present. ++ COMMAND ${CMAKE_COMMAND} -E make_directory "${arg_DOCUMENTATION_SOURCE_DIR}" + COMMAND ${CMAKE_COMMAND} -E copy_directory + "${arg_DOCUMENTATION_SOURCE_DIR}" + "${arg_DESTINATION_DIRECTORY}" diff --git a/science/paraview/files/patch-CommandLineExecutables_CMakeLists.txt b/science/paraview/files/patch-CommandLineExecutables_CMakeLists.txt new file mode 100644 index 000000000000..93a6f27c523a --- /dev/null +++ b/science/paraview/files/patch-CommandLineExecutables_CMakeLists.txt @@ -0,0 +1,11 @@ +--- CommandLineExecutables/CMakeLists.txt.orig 2018-06-01 19:23:15 UTC ++++ CommandLineExecutables/CMakeLists.txt +@@ -67,7 +67,7 @@ foreach (vtk_module IN LISTS VTK_MODULES + if (vtk_module_library STREQUAL "optimized" OR + vtk_module_library STREQUAL "debug") + unset(vtk_module_library_name) +- elseif (vtk_module_library MATCHES "^-l") ++ elseif (vtk_module_library MATCHES "^-l|^-p") + string(SUBSTRING "${vtk_module_library}" 2 -1 vtk_module_library) + find_library(vtk_module_library_name "${vtk_module_library}") + elseif (IS_ABSOLUTE "${vtk_module_library}") diff --git a/science/paraview/files/patch-ParaViewCore_ClientServerCore_Default_vtkPVFileInformation.h b/science/paraview/files/patch-ParaViewCore_ClientServerCore_Default_vtkPVFileInformation.h new file mode 100644 index 000000000000..c200a77b33c3 --- /dev/null +++ b/science/paraview/files/patch-ParaViewCore_ClientServerCore_Default_vtkPVFileInformation.h @@ -0,0 +1,10 @@ +--- ParaViewCore/ClientServerCore/Default/vtkPVFileInformation.h.orig 2018-06-01 19:23:15 UTC ++++ ParaViewCore/ClientServerCore/Default/vtkPVFileInformation.h +@@ -31,6 +31,7 @@ + #include "vtkPVInformation.h" + + #include // Needed for std::string ++#include + + class vtkCollection; + class vtkPVFileInformationSet; diff --git a/science/paraview/files/patch-ParaViewCore_VTKExtensions_Default_vtkPhastaReader.cxx b/science/paraview/files/patch-ParaViewCore_VTKExtensions_Default_vtkPhastaReader.cxx new file mode 100644 index 000000000000..7755ae11b00e --- /dev/null +++ b/science/paraview/files/patch-ParaViewCore_VTKExtensions_Default_vtkPhastaReader.cxx @@ -0,0 +1,11 @@ +--- ParaViewCore/VTKExtensions/Default/vtkPhastaReader.cxx.orig 2018-06-01 19:23:15 UTC ++++ ParaViewCore/VTKExtensions/Default/vtkPhastaReader.cxx +@@ -200,7 +200,7 @@ int vtkPhastaReader::readHeader(FILE* fi + { + text_header = new char[real_length + 1]; + strncpy(text_header, Line, real_length); +- text_header[real_length] = static_cast(NULL); ++ text_header[real_length] = static_cast(0); + token = strtok(text_header, ":"); + if (cscompare(phrase, token)) + { diff --git a/science/paraview/files/patch-Plugins_CDIReader_cdilib.c b/science/paraview/files/patch-Plugins_CDIReader_cdilib.c new file mode 100644 index 000000000000..c04873751895 --- /dev/null +++ b/science/paraview/files/patch-Plugins_CDIReader_cdilib.c @@ -0,0 +1,11 @@ +--- Plugins/CDIReader/cdilib.c.orig 2018-06-01 19:23:15 UTC ++++ Plugins/CDIReader/cdilib.c +@@ -47,7 +47,7 @@ + #define _XOPEN_SOURCE 600 + #endif + +-#if defined(__linux__) || defined(__APPLE__) ++#if defined(__linux__) || defined(__APPLE__) || defined(__FreeBSD__) + #include + #include + #include diff --git a/science/paraview/files/patch-c83b583c.c b/science/paraview/files/patch-c83b583c.c new file mode 100644 index 000000000000..b8a6268f8cb3 --- /dev/null +++ b/science/paraview/files/patch-c83b583c.c @@ -0,0 +1,22 @@ +diff --git a/ThirdParty/exodusII/vtkexodusII/src/ex_create_par.c b/ThirdParty/exodusII/vtkexodusII/src/ex_create_par.c +index 8d5d6734f0ad2df04393cf7909ef2c342785e1ac..ef439618dae7b90fdf1057f7051c6a9f0bf1f72d 100644 +--- VTK/ThirdParty/exodusII/vtkexodusII/src/ex_create_par.c ++++ VTK/ThirdParty/exodusII/vtkexodusII/src/ex_create_par.c +@@ -216,5 +216,5 @@ int ex_create_par_int(const char *path, int cmode, int *comp_ws, int *io_ws, MPI + * Prevent warning in some versions of ranlib(1) because the object + * file has no symbols. + */ +-const char exodus_unused_symbol_dummy_1; ++const char exodus_unused_symbol_dummy_ex_create_par; + #endif +diff --git a/ThirdParty/exodusII/vtkexodusII/src/ex_open_par.c b/ThirdParty/exodusII/vtkexodusII/src/ex_open_par.c +index b2faa22c29489446030f537bb6b3a26feb86c50b..9df4818767d07a3020f1363fe2a8b9f2fcac634a 100644 +--- VTK/ThirdParty/exodusII/vtkexodusII/src/ex_open_par.c ++++ VTK/ThirdParty/exodusII/vtkexodusII/src/ex_open_par.c +@@ -459,5 +459,5 @@ int ex_open_par_int(const char *path, int mode, int *comp_ws, int *io_ws, float + * Prevent warning in some versions of ranlib(1) because the object + * file has no symbols. + */ +-const char exodus_unused_symbol_dummy_1; ++const char exodus_unused_symbol_dummy_ex_open_par; + #endif diff --git a/science/paraview/pkg-descr b/science/paraview/pkg-descr new file mode 100644 index 000000000000..87809f8714dc --- /dev/null +++ b/science/paraview/pkg-descr @@ -0,0 +1,4 @@ +ParaView is a powerful scientific visualization application, designed with the +need to visualize large data sets in mind. + +WWW: http://www.paraview.org/ diff --git a/science/paraview/pkg-plist b/science/paraview/pkg-plist new file mode 100644 index 000000000000..a49345c00954 --- /dev/null +++ b/science/paraview/pkg-plist @@ -0,0 +1,2631 @@ +bin/paraview +bin/paraview-config +bin/pvbatch +bin/pvdataserver +bin/pvpython +bin/pvrenderserver +bin/pvserver +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Cholesky +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/CholmodSupport +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Core +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Dense +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Eigen +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Eigenvalues +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Geometry +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Householder +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/IterativeLinearSolvers +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Jacobi +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/LU +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/MetisSupport +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/OrderingMethods +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/PaStiXSupport +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/PardisoSupport +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/QR +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/QtAlignedMalloc +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/SPQRSupport +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/SVD +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/Sparse +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/SparseCholesky +include/paraview-%%VERMAJORMINOR%%/vtkeigen/eigen/SparseCore 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