git: f869d6b41205 - main - biology/biolibc-tools: Update to 0.1.3
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Date: Sat, 11 Jun 2022 14:27:01 UTC
The branch main has been updated by jwb: URL: https://cgit.FreeBSD.org/ports/commit/?id=f869d6b4120504eac85add6520b1b74e6144ac5d commit f869d6b4120504eac85add6520b1b74e6144ac5d Author: Jason W. Bacon <jwb@FreeBSD.org> AuthorDate: 2022-06-11 14:09:12 +0000 Commit: Jason W. Bacon <jwb@FreeBSD.org> CommitDate: 2022-06-11 14:26:56 +0000 biology/biolibc-tools: Update to 0.1.3 Add vcf-downsample subcommand Improvements to build system extract-seq: Recurse to output subfeatures Numerous other minor enhancements and fixes Changes: https://github.com/auerlab/biolibc-tools/tags --- biology/biolibc-tools/Makefile | 2 +- biology/biolibc-tools/distinfo | 6 +++--- biology/biolibc-tools/pkg-plist | 2 ++ 3 files changed, 6 insertions(+), 4 deletions(-) diff --git a/biology/biolibc-tools/Makefile b/biology/biolibc-tools/Makefile index 7cf0341514eb..739f81d62fa7 100644 --- a/biology/biolibc-tools/Makefile +++ b/biology/biolibc-tools/Makefile @@ -1,7 +1,7 @@ # Created by: J. Bacon <jwb@FreeBSD.org> PORTNAME= biolibc-tools -DISTVERSION= 0.1.2 +DISTVERSION= 0.1.3 CATEGORIES= biology MAINTAINER= jwb@FreeBSD.org diff --git a/biology/biolibc-tools/distinfo b/biology/biolibc-tools/distinfo index e513f059cd26..c74c87b2dc3e 100644 --- a/biology/biolibc-tools/distinfo +++ b/biology/biolibc-tools/distinfo @@ -1,3 +1,3 @@ -TIMESTAMP = 1647347831 -SHA256 (auerlab-biolibc-tools-0.1.2_GH0.tar.gz) = 817b3f88b1d83a28389dbbb43ef1e0d2c1fb3b7e72ca7151fa26a35058ef4558 -SIZE (auerlab-biolibc-tools-0.1.2_GH0.tar.gz) = 24610 +TIMESTAMP = 1654951264 +SHA256 (auerlab-biolibc-tools-0.1.3_GH0.tar.gz) = 0d5d983ea84e2aa8b23a4954b06f0f7b2eee033b570bf593d75a1196989b985e +SIZE (auerlab-biolibc-tools-0.1.3_GH0.tar.gz) = 27735 diff --git a/biology/biolibc-tools/pkg-plist b/biology/biolibc-tools/pkg-plist index b82ed3ef61dc..f936b1acd1cf 100644 --- a/biology/biolibc-tools/pkg-plist +++ b/biology/biolibc-tools/pkg-plist @@ -10,6 +10,7 @@ libexec/biolibc-tools/fastx2tsv libexec/biolibc-tools/find-orfs libexec/biolibc-tools/gff2bed libexec/biolibc-tools/uniq-seqs.awk +libexec/biolibc-tools/vcf-downsample libexec/biolibc-tools/vcf-search man/man1/blt-chrom-lens.1.gz man/man1/blt-ensemblid2gene.1.gz @@ -21,5 +22,6 @@ man/man1/blt-fastx-stats.1.gz man/man1/blt-fastx2tsv.1.gz man/man1/blt-find-orfs.1.gz man/man1/blt-gff2bed.1.gz +man/man1/blt-vcf-downsample.1.gz man/man1/blt-vcf-search.1.gz man/man1/blt.1.gz