From nobody Tue Jul 19 15:51:59 2022 X-Original-To: dev-commits-ports-all@mlmmj.nyi.freebsd.org Received: from mx1.freebsd.org (mx1.freebsd.org [IPv6:2610:1c1:1:606c::19:1]) by mlmmj.nyi.freebsd.org (Postfix) with ESMTP id 4LnNcb6Tcqz4TQkL; Tue, 19 Jul 2022 15:51:59 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from mxrelay.nyi.freebsd.org (mxrelay.nyi.freebsd.org [IPv6:2610:1c1:1:606c::19:3]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256 client-signature RSA-PSS (4096 bits) client-digest SHA256) (Client CN "mxrelay.nyi.freebsd.org", Issuer "R3" (verified OK)) by mx1.freebsd.org (Postfix) with ESMTPS id 4LnNcb62l3z3qQB; Tue, 19 Jul 2022 15:51:59 +0000 (UTC) (envelope-from git@FreeBSD.org) DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1658245919; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=1MiOlQZPKXvOn9xX6b1PDibMmVElGz4/UzrzeE7OAY4=; b=lpl2kxKFxr0sdah+zooAzIJiAvOWF0VWJ8f+OhSVqhCRqne7E8HtizTosaom+vE77qlyEn iOiKhMDvXftb+ZrqLYXAyi/yLdyk0LQHRRnaJlOwuNT7kl+mOclMvUjxYzN7wPK6FDTcsX ue44OzTcikKbPR04hA3ZzqTzuY3UC5F3YaBEmU7dYIIDoEWG4yfCNPjfWPCT3A40n5HDmn iCXMlKY5QUnbMlTTkiN3//C0VeM61a6el6U9uP5Grld5WeoLP0KXZqiI5qRcGVGKqYqSCT iDFFmnE9i/dUUPP6oJ+/eQBMuWMSq0+ewQCBtWtldcnicmeTFTwk20SbCQToIQ== Received: from gitrepo.freebsd.org (gitrepo.freebsd.org [IPv6:2610:1c1:1:6068::e6a:5]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits) key-exchange X25519 server-signature RSA-PSS (4096 bits) server-digest SHA256) (Client did not present a certificate) by mxrelay.nyi.freebsd.org (Postfix) with ESMTPS id 4LnNcb51nPzPh7; Tue, 19 Jul 2022 15:51:59 +0000 (UTC) (envelope-from git@FreeBSD.org) Received: from gitrepo.freebsd.org ([127.0.1.44]) by gitrepo.freebsd.org (8.16.1/8.16.1) with ESMTP id 26JFpxVo000436; Tue, 19 Jul 2022 15:51:59 GMT (envelope-from git@gitrepo.freebsd.org) Received: (from git@localhost) by gitrepo.freebsd.org (8.16.1/8.16.1/Submit) id 26JFpxP6000435; Tue, 19 Jul 2022 15:51:59 GMT (envelope-from git) Date: Tue, 19 Jul 2022 15:51:59 GMT Message-Id: <202207191551.26JFpxP6000435@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Yuri Victorovich Subject: git: 978fbbf602c7 - main - biology/py-pysam: Remove BROKEN lines List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: yuri X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 978fbbf602c743b555117a6c25a836ebfa5bbaf2 Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; s=dkim; t=1658245919; h=from:from:reply-to:subject:subject:date:date:message-id:message-id: to:to:cc:mime-version:mime-version:content-type:content-type: content-transfer-encoding:content-transfer-encoding; bh=1MiOlQZPKXvOn9xX6b1PDibMmVElGz4/UzrzeE7OAY4=; b=Hl1bXrJGR57G9N/+z8P6cVdu2K8hPDZ0R6a5bx9Oh+gmDwcKSDFssmgRVEkVdrSGZs1Hrb NR0CLW9vmtO2WOA7lD5f5xeegNCAgHZJ7WpzVUFe3ikdx52fE2VrWgBZjK/gMqlIJ2zYP6 cnleBbp+CGARfwj8IteMXun+mESfW6vM0UarfjYamCA3weLIGxfyEwsMTZxcZ8xnaWJlHY HnYDeJIqK0UdiPUyVtyxFar90wUDET4rpaix990n71KnNFhX0363g3Yz0noJ9VDlvzZe5W 3xYgZG67OlS7J0zdgeGiiZNojgyLoCXhCeSYjmtuUH5a7JN2EdEWUNR3BgkIzw== ARC-Seal: i=1; s=dkim; d=freebsd.org; t=1658245919; a=rsa-sha256; cv=none; b=pBCsuTeskZJM5cwLyYIfh3ngq/+8pJX3+XVr50zbzYAqJZpU+Y7Qf/bJtqz7aknqige+lX rrjBmnYo+naP4YL4SXesPdzaWuQDUBXTruTsueoVTTCIxXF9qetEl1RhghpaXx7r18A0f6 HFm50aX+tnVDkdX12q7x+LkbRvsLjPyNmjG7T75Y5wuuQaL1tg2xRIsH1IDEPD01v+lAKj ih16S+Dn+bvuMa0Ijw9jympls3ON3VXZzfUzLvkD1T8CXk9ZExVMlKwH2r5RWUDEX0UJ6w X9fjpINo7ba/TJ9ixPobLPbLx309sj/IDDNPRZZKVyo526F25AAFaImVncvffA== ARC-Authentication-Results: i=1; mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by yuri: URL: https://cgit.FreeBSD.org/ports/commit/?id=978fbbf602c743b555117a6c25a836ebfa5bbaf2 commit 978fbbf602c743b555117a6c25a836ebfa5bbaf2 Author: Yuri Victorovich AuthorDate: 2022-07-19 15:51:36 +0000 Commit: Yuri Victorovich CommitDate: 2022-07-19 15:51:56 +0000 biology/py-pysam: Remove BROKEN lines --- biology/py-pysam/Makefile | 4 ---- 1 file changed, 4 deletions(-) diff --git a/biology/py-pysam/Makefile b/biology/py-pysam/Makefile index debed1535b41..810049593342 100644 --- a/biology/py-pysam/Makefile +++ b/biology/py-pysam/Makefile @@ -14,10 +14,6 @@ COMMENT= Python module for reading, manipulating and writing genomic data sets LICENSE= MIT LICENSE_FILE= ${WRKSRC}/COPYING -# see https://github.com/pysam-developers/pysam/issues/1121 for below failures -BROKEN_aarch64= conflicting symbol (libchtslib libcsamtools ...) : $d.6 -BROKEN_riscv6= conflicting symbol (libchtslib libcsamtools ...): .Lline_table_start0 - USES= gmake python:3.6-3.9 USE_PYTHON= autoplist distutils cython cython_run