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Mon, 18 Jul 2022 12:51:49 GMT (envelope-from git) Date: Mon, 18 Jul 2022 12:51:49 GMT Message-Id: <202207181251.26ICpnZJ091893@gitrepo.freebsd.org> To: ports-committers@FreeBSD.org, dev-commits-ports-all@FreeBSD.org, dev-commits-ports-main@FreeBSD.org From: Po-Chuan Hsieh Subject: git: 1bc7803607e7 - main - science/hdf5-110: Add hd5-110 1.10.9 (copied from hdf5) List-Id: Commit messages for all branches of the ports repository List-Archive: https://lists.freebsd.org/archives/dev-commits-ports-all List-Help: List-Post: List-Subscribe: List-Unsubscribe: Sender: owner-dev-commits-ports-all@freebsd.org X-BeenThere: dev-commits-ports-all@freebsd.org MIME-Version: 1.0 Content-Type: text/plain; charset=utf-8 Content-Transfer-Encoding: 8bit X-Git-Committer: sunpoet X-Git-Repository: ports X-Git-Refname: refs/heads/main X-Git-Reftype: branch X-Git-Commit: 1bc7803607e7e0a8cac9c011a3684859d3ab2953 Auto-Submitted: auto-generated ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=freebsd.org; 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mx1.freebsd.org; none X-ThisMailContainsUnwantedMimeParts: N The branch main has been updated by sunpoet: URL: https://cgit.FreeBSD.org/ports/commit/?id=1bc7803607e7e0a8cac9c011a3684859d3ab2953 commit 1bc7803607e7e0a8cac9c011a3684859d3ab2953 Author: Po-Chuan Hsieh AuthorDate: 2022-07-18 12:50:15 +0000 Commit: Po-Chuan Hsieh CommitDate: 2022-07-18 12:50:15 +0000 science/hdf5-110: Add hd5-110 1.10.9 (copied from hdf5) - Add PKGNAMESUFFIX - Install files with suffix: - Install binary executables with -110 suffix - Install include files to hdf5-110 sub-directory - Install examples to EXAMPLESDIR with -110 suffix - Add PORTSCOUT PR: 265152 Exp-run by: antoine --- science/Makefile | 1 + science/hdf5-110/Makefile | 79 +++++++++++++ science/hdf5-110/distinfo | 3 + science/hdf5-110/pkg-descr | 18 +++ science/hdf5-110/pkg-plist | 269 +++++++++++++++++++++++++++++++++++++++++++++ 5 files changed, 370 insertions(+) diff --git a/science/Makefile b/science/Makefile index 648f773a9878..27fa79ab7d7c 100644 --- a/science/Makefile +++ b/science/Makefile @@ -110,6 +110,7 @@ SUBDIR += harminv SUBDIR += hdf SUBDIR += hdf5 + SUBDIR += hdf5-110 SUBDIR += hdf5-18 SUBDIR += healpix SUBDIR += helfem diff --git a/science/hdf5-110/Makefile b/science/hdf5-110/Makefile new file mode 100644 index 000000000000..ccff2103c287 --- /dev/null +++ b/science/hdf5-110/Makefile @@ -0,0 +1,79 @@ +# Created by: ijliao + +PORTNAME= hdf5 +PORTVERSION= 1.10.9 +CATEGORIES= science archivers graphics +MASTER_SITES= https://support.hdfgroup.org/ftp/HDF5/releases/hdf5-${PORTVERSION:R}/${DISTNAME}/src/ \ + LOCAL/sunpoet +PKGNAMESUFFIX= -110 + +MAINTAINER= sunpoet@FreeBSD.org +COMMENT= Hierarchical Data Format library (from NCSA) 1.10.x + +LICENSE= BSD4CLAUSE +LICENSE_FILE= ${WRKSRC}/COPYING + +USES= compiler:c11 cpe libtool localbase tar:bzip2 + +CONFIGURE_ARGS= --enable-hl \ + --enable-instrument \ + --enable-strict-format-checks \ + --includedir=${PREFIX}/include/hdf5${PKGNAMESUFFIX} \ + --program-suffix=${PKGNAMESUFFIX} \ + --with-default-api-version=v110 +GNU_CONFIGURE= yes +INSTALL_TARGET= install-strip +MAKE_JOBS_UNSAFE= yes +TEST_TARGET= check +USE_LDCONFIG= yes + +EXAMPLESDIR= ${PREFIX}/share/examples/hdf5${PKGNAMESUFFIX} + +CONFLICTS_INSTALL= hdf + +CPE_VENDOR= hdfgroup + +PORTSCOUT= limit:^1\.10\. + +OPTIONS_DEFINE= DEBUG EXAMPLES FORTRAN SZIP +OPTIONS_RADIO= SUPPORT +OPTIONS_RADIO_SUPPORT= CXX PARALLEL +OPTIONS_DEFAULT=CXX SZIP +OPTIONS_SUB= yes +PARALLEL_DESC= Parallel support + +CXX_CONFIGURE_ENABLE= cxx +DEBUG_CONFIGURE_OFF= --enable-build-mode=production +DEBUG_CONFIGURE_ON= --enable-build-mode=debug +FORTRAN_CONFIGURE_ENABLE= fortran +FORTRAN_CONFIGURE_ENV= F9X=${FC} +FORTRAN_USES= fortran +PARALLEL_CONFIGURE_ENABLE= parallel +PARALLEL_LDFLAGS= -L${LOCALBASE}/lib -lmpi +PARALLEL_LIB_DEPENDS= libmpi.so:net/mpich +SZIP_CONFIGURE_ON= --with-szlib=${LOCALBASE} +SZIP_LIB_DEPENDS= libsz.so:science/libaec + +post-patch: + @${REINPLACE_CMD} -e 's|hdf5_examples|examples/hdf5${PKGNAMESUFFIX}|' ${WRKSRC}/configure + @${REINPLACE_CMD} -e 's|-O3||g' ${WRKSRC}/config/gnu-flags + @${REINPLACE_CMD} \ + -e '/LD_LIBRARY_PATH/ s|^|#|' \ + -e 's|(INSTALL)|(INSTALL_DATA)|' \ + `${FIND} ${WRKSRC} -regex '.*/examples/Makefile.in'` + @${REINPLACE_CMD} -e 's|\[ -a|\[ -f|g' `${FIND} ${WRKSRC} -name \*.sh\*` + @${FIND} ${WRKSRC} -name Makefile.in | ${XARGS} \ + ${REINPLACE_CMD} -e 's|libhdf5|libhdf5${PKGNAMESUFFIX}|g' \ + -e 's|libhdf5${PKGNAMESUFFIX}.settings|libhdf5.settings|g' + @${REINPLACE_CMD} -e 's|libhdf5|libhdf5${PKGNAMESUFFIX}|g' ${WRKSRC}/test/testlibinfo.sh.in + +post-install: + ${MV} ${STAGEDIR}${PREFIX}/lib/libhdf5.settings ${STAGEDIR}${PREFIX}/lib/libhdf5${PKGNAMESUFFIX}.settings + +post-install-CXX-on: + ${MV} ${STAGEDIR}${PREFIX}/bin/h5cc ${STAGEDIR}${PREFIX}/bin/h5cc${PKGNAMESUFFIX} + +post-install-FORTRAN-on: + ${MV} ${STAGEDIR}${PREFIX}/bin/h5fc ${STAGEDIR}${PREFIX}/bin/h5fc${PKGNAMESUFFIX} + +.include diff --git a/science/hdf5-110/distinfo b/science/hdf5-110/distinfo new file mode 100644 index 000000000000..8d8f933aa991 --- /dev/null +++ b/science/hdf5-110/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1655148219 +SHA256 (hdf5-1.10.9.tar.bz2) = 00c4be7096f36fdcafa4f974e126c6c1412428e38ebc7b181d907459e781f191 +SIZE (hdf5-1.10.9.tar.bz2) = 10703325 diff --git a/science/hdf5-110/pkg-descr b/science/hdf5-110/pkg-descr new file mode 100644 index 000000000000..157b34c18263 --- /dev/null +++ b/science/hdf5-110/pkg-descr @@ -0,0 +1,18 @@ +HDF5 is a completely new Hierarchical Data Format product consisting of a data +format specification and a supporting library implementation. HDF5 is designed +to address some of the limitations of the older HDF product and to address +current and anticipated requirements of modern systems and applications. + +HDF5 includes the following improvements: +- A new file format designed to address some of the deficiencies of HDF4.x, + particularly the need to store larger files and more objects per file. +- A simpler, more comprehensive data model that includes only two basic + structures: a multidimensional array of record structures, and a grouping + structure. +- A simpler, better-engineered library and API, with improved support for + parallel I/O, threads, and other requirements imposed by modern systems + and applications. + +Note: this is a legacy version, the latest is available as science/hdf5. + +WWW: https://www.hdfgroup.org/ diff --git a/science/hdf5-110/pkg-plist b/science/hdf5-110/pkg-plist new file mode 100644 index 000000000000..86770ce739d4 --- /dev/null +++ b/science/hdf5-110/pkg-plist @@ -0,0 +1,269 @@ +bin/gif2h5-110 +bin/h52gif-110 +%%CXX%%bin/h5c++-110 +%%CXX%%bin/h5cc-110 +bin/h5clear-110 +bin/h5copy-110 +bin/h5debug-110 +bin/h5diff-110 +bin/h5dump-110 +%%FORTRAN%%%%NO_PARALLEL%%bin/h5fc-110 +bin/h5format_convert-110 +bin/h5import-110 +bin/h5jam-110 +bin/h5ls-110 +bin/h5mkgrp-110 +%%PARALLEL%%bin/h5pcc-110 +%%PARALLEL%%bin/h5perf-110 +%%NO_PARALLEL%%bin/h5perf_serial-110 +bin/h5redeploy-110 +bin/h5repack-110 +bin/h5repart-110 +bin/h5stat-110 +bin/h5unjam-110 +bin/h5watch-110 +%%PARALLEL%%bin/ph5diff-110 +include/hdf5-110/H5ACpublic.h +%%CXX%%include/hdf5-110/H5AbstractDs.h +include/hdf5-110/H5Apublic.h +%%CXX%%include/hdf5-110/H5ArrayType.h +%%CXX%%include/hdf5-110/H5AtomType.h +%%CXX%%include/hdf5-110/H5Attribute.h +%%CXX%%include/hdf5-110/H5Classes.h +%%CXX%%include/hdf5-110/H5CommonFG.h +%%CXX%%include/hdf5-110/H5CompType.h +%%CXX%%include/hdf5-110/H5Cpp.h +%%CXX%%include/hdf5-110/H5CppDoc.h +include/hdf5-110/H5Cpublic.h +include/hdf5-110/H5DOpublic.h +include/hdf5-110/H5DSpublic.h +%%CXX%%include/hdf5-110/H5DaccProp.h +%%CXX%%include/hdf5-110/H5DataSet.h +%%CXX%%include/hdf5-110/H5DataSpace.h +%%CXX%%include/hdf5-110/H5DataType.h +%%CXX%%include/hdf5-110/H5DcreatProp.h +include/hdf5-110/H5Dpublic.h +%%CXX%%include/hdf5-110/H5DxferProp.h +%%CXX%%include/hdf5-110/H5EnumType.h +include/hdf5-110/H5Epubgen.h +include/hdf5-110/H5Epublic.h +%%CXX%%include/hdf5-110/H5Exception.h +include/hdf5-110/H5FDcore.h +include/hdf5-110/H5FDdirect.h +include/hdf5-110/H5FDfamily.h +include/hdf5-110/H5FDhdfs.h +include/hdf5-110/H5FDlog.h +include/hdf5-110/H5FDmirror.h +include/hdf5-110/H5FDmpi.h +include/hdf5-110/H5FDmpio.h +include/hdf5-110/H5FDmulti.h +include/hdf5-110/H5FDpublic.h +include/hdf5-110/H5FDros3.h +include/hdf5-110/H5FDsec2.h +include/hdf5-110/H5FDsplitter.h +include/hdf5-110/H5FDstdio.h +include/hdf5-110/H5FDwindows.h +%%CXX%%include/hdf5-110/H5FaccProp.h +%%CXX%%include/hdf5-110/H5FcreatProp.h +%%CXX%%include/hdf5-110/H5File.h +%%CXX%%include/hdf5-110/H5FloatType.h +include/hdf5-110/H5Fpublic.h +include/hdf5-110/H5Gpublic.h +%%CXX%%include/hdf5-110/H5Group.h +include/hdf5-110/H5IMpublic.h +%%CXX%%include/hdf5-110/H5IdComponent.h +%%CXX%%include/hdf5-110/H5Include.h +%%CXX%%include/hdf5-110/H5IntType.h +include/hdf5-110/H5Ipublic.h +include/hdf5-110/H5LDpublic.h +include/hdf5-110/H5LTpublic.h +%%CXX%%include/hdf5-110/H5LaccProp.h +%%CXX%%include/hdf5-110/H5LcreatProp.h +%%CXX%%include/hdf5-110/H5Library.h +%%CXX%%include/hdf5-110/H5Location.h +include/hdf5-110/H5Lpublic.h +include/hdf5-110/H5MMpublic.h +%%CXX%%include/hdf5-110/H5Object.h +%%CXX%%include/hdf5-110/H5OcreatProp.h +include/hdf5-110/H5Opublic.h +include/hdf5-110/H5PLextern.h +include/hdf5-110/H5PLpublic.h +include/hdf5-110/H5PTpublic.h +%%CXX%%include/hdf5-110/H5PacketTable.h +include/hdf5-110/H5Ppublic.h +%%CXX%%include/hdf5-110/H5PredType.h +%%CXX%%include/hdf5-110/H5PropList.h +include/hdf5-110/H5Rpublic.h +include/hdf5-110/H5Spublic.h +%%CXX%%include/hdf5-110/H5StrType.h +include/hdf5-110/H5TBpublic.h +include/hdf5-110/H5Tpublic.h +%%CXX%%include/hdf5-110/H5VarLenType.h +include/hdf5-110/H5Zpublic.h +include/hdf5-110/H5api_adpt.h +%%FORTRAN%%include/hdf5-110/H5f90i.h +%%FORTRAN%%include/hdf5-110/H5f90i_gen.h +include/hdf5-110/H5overflow.h +include/hdf5-110/H5pubconf.h +include/hdf5-110/H5public.h +include/hdf5-110/H5version.h +%%FORTRAN%%include/hdf5-110/h5_gen.mod +%%FORTRAN%%include/hdf5-110/h5a.mod +%%FORTRAN%%include/hdf5-110/h5d.mod +%%FORTRAN%%include/hdf5-110/h5ds.mod +%%FORTRAN%%include/hdf5-110/h5e.mod +%%FORTRAN%%include/hdf5-110/h5f.mod +%%FORTRAN%%include/hdf5-110/h5fortkit.mod +%%FORTRAN%%include/hdf5-110/h5fortran_types.mod +%%FORTRAN%%include/hdf5-110/h5g.mod +%%FORTRAN%%include/hdf5-110/h5global.mod +%%FORTRAN%%include/hdf5-110/h5i.mod +%%FORTRAN%%include/hdf5-110/h5im.mod +%%FORTRAN%%include/hdf5-110/h5l.mod +%%FORTRAN%%include/hdf5-110/h5lib.mod +%%FORTRAN%%include/hdf5-110/h5lt.mod +%%FORTRAN%%include/hdf5-110/h5lt_const.mod +%%FORTRAN%%include/hdf5-110/h5o.mod +%%FORTRAN%%include/hdf5-110/h5p.mod +%%FORTRAN%%include/hdf5-110/h5r.mod +%%FORTRAN%%include/hdf5-110/h5s.mod +%%FORTRAN%%include/hdf5-110/h5t.mod +%%FORTRAN%%include/hdf5-110/h5tb.mod +%%FORTRAN%%include/hdf5-110/h5tb_const.mod +%%FORTRAN%%include/hdf5-110/h5z.mod +include/hdf5-110/hdf5.h +%%FORTRAN%%include/hdf5-110/hdf5.mod +include/hdf5-110/hdf5_hl.h +lib/libhdf5-110.a +lib/libhdf5-110.settings +lib/libhdf5-110.so +lib/libhdf5-110.so.103 +lib/libhdf5-110.so.103.3.2 +%%CXX%%lib/libhdf5-110_cpp.a +%%CXX%%lib/libhdf5-110_cpp.so +%%CXX%%lib/libhdf5-110_cpp.so.103 +%%CXX%%lib/libhdf5-110_cpp.so.103.4.1 +%%FORTRAN%%lib/libhdf5-110_fortran.a +%%FORTRAN%%lib/libhdf5-110_fortran.so +%%FORTRAN%%lib/libhdf5-110_fortran.so.102 +%%FORTRAN%%lib/libhdf5-110_fortran.so.102.1.2 +lib/libhdf5-110_hl.a +lib/libhdf5-110_hl.so +lib/libhdf5-110_hl.so.100 +lib/libhdf5-110_hl.so.100.1.6 +%%CXX%%lib/libhdf5-110_hl_cpp.a +%%CXX%%lib/libhdf5-110_hl_cpp.so +%%CXX%%lib/libhdf5-110_hl_cpp.so.100 +%%CXX%%lib/libhdf5-110_hl_cpp.so.100.1.7 +%%FORTRAN%%lib/libhdf5-110_hl_fortran.a +%%FORTRAN%%lib/libhdf5-110_hl_fortran.so +%%FORTRAN%%lib/libhdf5-110hl_fortran.a +%%FORTRAN%%lib/libhdf5-110hl_fortran.so +%%FORTRAN%%lib/libhdf5-110hl_fortran.so.100 +%%FORTRAN%%lib/libhdf5-110hl_fortran.so.100.0.8 +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/README +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/chunks.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/compound.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/create.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/extend_ds.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5group.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_cmprss.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtatt.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtdat.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtgrp.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtgrpar.cpp +%%PORTEXAMPLES%%%%EXAMPLESDIR%%/c++/h5tutr_crtgrpd.cpp 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