[package - 130releng-armv7-quarterly][math/R-cran-dplyr] Failed for R-cran-dplyr-1.0.8 in stage/runaway
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Date: Thu, 16 Jun 2022 11:04:35 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.
Maintainer: wen@FreeBSD.org
Log URL: http://beefy12.nyi.freebsd.org/data/130releng-armv7-quarterly/3b240a5883b6/logs/R-cran-dplyr-1.0.8.log
Build URL: http://beefy12.nyi.freebsd.org/build.html?mastername=130releng-armv7-quarterly&build=3b240a5883b6
Log:
=>> Building math/R-cran-dplyr
build started at Thu Jun 16 04:26:55 UTC 2022
port directory: /usr/ports/math/R-cran-dplyr
package name: R-cran-dplyr-1.0.8
building for: FreeBSD 130releng-armv7-quarterly-job-09 13.0-RELEASE-p11 FreeBSD 13.0-RELEASE-p11 1300139 arm
maintained by: wen@FreeBSD.org
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=======================<phase: check-sanity >============================
===> License MIT accepted by the user
===========================================================================
=======================<phase: pkg-depends >============================
===> R-cran-dplyr-1.0.8 depends on file: /usr/local/sbin/pkg - not found
===> Installing existing package /packages/All/pkg-1.17.5_1.pkg
[130releng-armv7-quarterly-job-09] Installing pkg-1.17.5_1...
[130releng-armv7-quarterly-job-09] Extracting pkg-1.17.5_1: .......... done
===> R-cran-dplyr-1.0.8 depends on file: /usr/local/sbin/pkg - found
===> Returning to build of R-cran-dplyr-1.0.8
===========================================================================
=======================<phase: fetch-depends >============================
===========================================================================
=======================<phase: fetch >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by R-cran-dplyr-1.0.8 for building
===========================================================================
=======================<phase: checksum >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by R-cran-dplyr-1.0.8 for building
=> SHA256 Checksum OK for dplyr_1.0.8.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract >============================
===> License MIT accepted by the user
===> Fetching all distfiles required by R-cran-dplyr-1.0.8 for building
===> Extracting for R-cran-dplyr-1.0.8
=> SHA256 Checksum OK for dplyr_1.0.8.tar.gz.
===========================================================================
<snip>
--
To ensure binaries built with this toolchain find appropriate versions
of the necessary run-time libraries, you may want to link using
-Wl,-rpath=/usr/local/lib/gcc10
For ports leveraging USE_GCC, USES=compiler, or USES=fortran this happens
transparently.
=====
Message from trousers-0.3.14_3:
--
To run tcsd automatically, add the following line to /etc/rc.conf:
tcsd_enable="YES"
You might want to edit /usr/local/etc/tcsd.conf to reflect your setup.
If you want to use tcsd with software TPM emulator, use the following
configuration in /etc/rc.conf:
tcsd_enable="YES"
tcsd_mode="emulator"
tpmd_enable="YES"
To use TPM, add your_account to '_tss' group like following:
# pw groupmod _tss -m your_account
=====
Message from ghostscript9-agpl-base-9.55.0_1:
--
This package installs a script named dvipdf that depends on dvips. If you
want to use this script you need to install print/tex-dvipsk.
=====
Message from dejavu-2.37_1:
--
Make sure that the freetype module is loaded. If it is not, add the following
line to the "Modules" section of your X Windows configuration file:
Load "freetype"
Add the following line to the "Files" section of X Windows configuration file:
FontPath "/usr/local/share/fonts/dejavu/"
Note: your X Windows configuration file is typically /etc/X11/XF86Config
if you are using XFree86, and /etc/X11/xorg.conf if you are using X.Org.
===> R-cran-dplyr-1.0.8 depends on package: R-cran-assertthat>=0.2.0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-generics>=0 - not found
===> Installing existing package /packages/All/R-cran-generics-0.1.2.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-generics-0.1.2...
[130releng-armv7-quarterly-job-09] Extracting R-cran-generics-0.1.2: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-generics>=0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-glue>=1.3.0 - not found
===> Installing existing package /packages/All/R-cran-glue-1.6.2.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-glue-1.6.2...
[130releng-armv7-quarterly-job-09] Extracting R-cran-glue-1.6.2: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-glue>=1.3.0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-magrittr>=1.5 - not found
===> Installing existing package /packages/All/R-cran-magrittr-2.0.3.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-magrittr-2.0.3...
[130releng-armv7-quarterly-job-09] Extracting R-cran-magrittr-2.0.3: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-magrittr>=1.5 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-pkgconfig>0 - not found
===> Installing existing package /packages/All/R-cran-pkgconfig-2.0.3_1.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-pkgconfig-2.0.3_1...
[130releng-armv7-quarterly-job-09] Extracting R-cran-pkgconfig-2.0.3_1: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-pkgconfig>0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-R6>0 - not found
===> Installing existing package /packages/All/R-cran-R6-2.5.1.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-R6-2.5.1...
[130releng-armv7-quarterly-job-09] Extracting R-cran-R6-2.5.1: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-R6>0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-Rcpp>=1.0.1 - not found
===> Installing existing package /packages/All/R-cran-Rcpp-1.0.8.3.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-Rcpp-1.0.8.3...
[130releng-armv7-quarterly-job-09] Extracting R-cran-Rcpp-1.0.8.3: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-Rcpp>=1.0.1 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-rlang>=0.4.0 - not found
===> Installing existing package /packages/All/R-cran-rlang-1.0.2.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-rlang-1.0.2...
[130releng-armv7-quarterly-job-09] Extracting R-cran-rlang-1.0.2: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-rlang>=0.4.0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-tibble>=2.0.0 - not found
===> Installing existing package /packages/All/R-cran-tibble-3.1.6.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-tibble-3.1.6...
[130releng-armv7-quarterly-job-09] `-- Installing R-cran-ellipsis-0.3.2...
[130releng-armv7-quarterly-job-09] `-- Extracting R-cran-ellipsis-0.3.2: .......... done
[130releng-armv7-quarterly-job-09] `-- Installing R-cran-fansi-1.0.3...
[130releng-armv7-quarterly-job-09] `-- Extracting R-cran-fansi-1.0.3: .......... done
[130releng-armv7-quarterly-job-09] `-- Installing R-cran-lifecycle-1.0.1...
[130releng-armv7-quarterly-job-09] `-- Extracting R-cran-lifecycle-1.0.1: .......... done
[130releng-armv7-quarterly-job-09] `-- Installing R-cran-pillar-1.7.0...
[130releng-armv7-quarterly-job-09] | `-- Installing R-cran-cli-3.2.0...
[130releng-armv7-quarterly-job-09] | `-- Extracting R-cran-cli-3.2.0: .......... done
[130releng-armv7-quarterly-job-09] | `-- Installing R-cran-crayon-1.5.1...
[130releng-armv7-quarterly-job-09] | `-- Extracting R-cran-crayon-1.5.1: .......... done
[130releng-armv7-quarterly-job-09] | `-- Installing R-cran-utf8-1.2.2...
[130releng-armv7-quarterly-job-09] | `-- Extracting R-cran-utf8-1.2.2: .......... done
[130releng-armv7-quarterly-job-09] | `-- Installing R-cran-vctrs-0.4.0...
[130releng-armv7-quarterly-job-09] | `-- Extracting R-cran-vctrs-0.4.0: .......... done
[130releng-armv7-quarterly-job-09] `-- Extracting R-cran-pillar-1.7.0: .......... done
[130releng-armv7-quarterly-job-09] Extracting R-cran-tibble-3.1.6: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-tibble>=2.0.0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-tidyselect>=0.2.5 - not found
===> Installing existing package /packages/All/R-cran-tidyselect-1.1.2.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-tidyselect-1.1.2...
[130releng-armv7-quarterly-job-09] `-- Installing R-cran-purrr-0.3.4_1...
[130releng-armv7-quarterly-job-09] `-- Extracting R-cran-purrr-0.3.4_1: .......... done
[130releng-armv7-quarterly-job-09] Extracting R-cran-tidyselect-1.1.2: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-tidyselect>=0.2.5 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-BH>0 - not found
===> Installing existing package /packages/All/R-cran-BH-1.78.0.0.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-BH-1.78.0.0...
[130releng-armv7-quarterly-job-09] Extracting R-cran-BH-1.78.0.0: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-BH>0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on package: R-cran-plogr>=0.2.0 - not found
===> Installing existing package /packages/All/R-cran-plogr-0.2.0_3.pkg
[130releng-armv7-quarterly-job-09] Installing R-cran-plogr-0.2.0_3...
[130releng-armv7-quarterly-job-09] Extracting R-cran-plogr-0.2.0_3: .......... done
===> R-cran-dplyr-1.0.8 depends on package: R-cran-plogr>=0.2.0 - found
===> Returning to build of R-cran-dplyr-1.0.8
===> R-cran-dplyr-1.0.8 depends on file: /usr/local/bin/R - found
===> R-cran-dplyr-1.0.8 depends on executable: gfortran10 - found
===> R-cran-dplyr-1.0.8 depends on file: /usr/local/bin/as - found
===========================================================================
=======================<phase: lib-depends >============================
===========================================================================
=======================<phase: configure >============================
===> Configuring for R-cran-dplyr-1.0.8
===========================================================================
=======================<phase: build >============================
===========================================================================
=======================<phase: run-depends >============================
===> R-cran-dplyr-1.0.8 depends on package: R-cran-assertthat>=0.2.0 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-generics>=0 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-glue>=1.3.0 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-magrittr>=1.5 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-pkgconfig>0 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-R6>0 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-Rcpp>=1.0.1 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-rlang>=0.4.0 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-tibble>=2.0.0 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-tidyselect>=0.2.5 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-BH>0 - found
===> R-cran-dplyr-1.0.8 depends on package: R-cran-plogr>=0.2.0 - found
===> R-cran-dplyr-1.0.8 depends on file: /usr/local/bin/R - found
===> R-cran-dplyr-1.0.8 depends on executable: gfortran10 - found
===========================================================================
=======================<phase: stage >============================
===> Staging for R-cran-dplyr-1.0.8
===> Generating temporary packing list
* installing *source* package 'dplyr' ...
** package 'dplyr' successfully unpacked and MD5 sums checked
** using staged installation
** libs
gmake[1]: Entering directory '/wrkdirs/usr/ports/math/R-cran-dplyr/work/dplyr/src'
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c chop.cpp -o chop.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c filter.cpp -o filter.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c funs.cpp -o funs.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c group_by.cpp -o group_by.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c group_data.cpp -o group_data.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c imports.cpp -o imports.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c init.cpp -o init.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c mask.cpp -o mask.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c mutate.cpp -o mutate.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c slice.cpp -o slice.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -I"/usr/local/lib/R/include" -DNDEBUG -DLIBICONV_PLUG -I/usr/local/include -isystem /usr/local/include -fpic -O2 -pipe -DLIBICONV_PLUG -fstack-protector-strong -isystem /usr/local/include -fno-strict-aliasing -DLIBICONV_PLUG -isystem /usr/local/include -c summarise.cpp -o summarise.o
/nxb-bin/usr/bin/c++ -std=gnu++14 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -Wl,-rpath=/usr/local/lib/gcc10 -L/usr/local/lib/gcc10 -B/usr/local/bin -fstack-protector-strong -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o slice.o summarise.o -L/usr/local/lib/R/lib -lR
gmake[1]: Leaving directory '/wrkdirs/usr/ports/math/R-cran-dplyr/work/dplyr/src'
installing to /wrkdirs/usr/ports/math/R-cran-dplyr/work/stage/usr/local/lib/R/library/00LOCK-dplyr/00new/dplyr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
=>> Killing runaway build after 21600 seconds with no output