[package - main-i386-default][biology/molden] Failed for molden-6.7,1 in build

From: <pkg-fallout_at_FreeBSD.org>
Date: Tue, 08 Feb 2022 23:01:04 UTC
You are receiving this mail as a port that you maintain
is failing to build on the FreeBSD package build server.
Please investigate the failure and submit a PR to fix
build.

Maintainer:     jmd@FreeBSD.org
Log URL:        http://beefy17.nyi.freebsd.org/data/main-i386-default/p4970d39a547c_s511b83b167/logs/molden-6.7,1.log
Build URL:      http://beefy17.nyi.freebsd.org/build.html?mastername=main-i386-default&build=p4970d39a547c_s511b83b167
Log:

=>> Building biology/molden
build started at Tue Feb  8 22:59:38 UTC 2022
port directory: /usr/ports/biology/molden
package name: molden-6.7,1
building for: FreeBSD main-i386-default-job-02 14.0-CURRENT FreeBSD 14.0-CURRENT 1400051 i386
maintained by: jmd@FreeBSD.org
Makefile ident: 
Poudriere version: 3.2.8-21-g883afb07
Host OSVERSION: 1400050
Jail OSVERSION: 1400051
Job Id: 02




!!! Jail is newer than host. (Jail: 1400051, Host: 1400050) !!!
!!! This is not supported. !!!
!!! Host kernel must be same or newer than jail. !!!
!!! Expect build failures. !!!



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---Begin OPTIONS List---
===> The following configuration options are available for molden-6.7,1:
     DATA=on: Install data files
     DOCS=on: Build and/or install documentation
===> Use 'make config' to modify these settings
---End OPTIONS List---

--MAINTAINER--
jmd@FreeBSD.org
--End MAINTAINER--

--CONFIGURE_ARGS--

--End CONFIGURE_ARGS--

--CONFIGURE_ENV--
F77="gfortran10" FC="gfortran10" FFLAGS="-O -Wl,-rpath=/usr/local/lib/gcc10 -fallow-argument-mismatch" FCFLAGS="-Wl,-rpath=/usr/local/lib/gcc10" MAKE=gmake XDG_DATA_HOME=/wrkdirs/usr/ports/biology/molden/work  XDG_CONFIG_HOME=/wrkdirs/usr/ports/biology/molden/work  XDG_CACHE_HOME=/wrkdirs/usr/ports/biology/molden/work/.cache  HOME=/wrkdirs/usr/ports/biology/molden/work TMPDIR="/tmp" PATH=/wrkdirs/usr/ports/biology/molden/work/.bin:/sbin:/bin:/usr/sbin:/usr/bin:/usr/local/sbin:/usr/local/bin:/root/bin SHELL=/bin/sh CONFIG_SHELL=/bin/sh
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--PLIST_SUB--
PORTDOCS="" OSREL=14.0 PREFIX=%D LOCALBASE=/usr/local  RESETPREFIX=/usr/local LIB32DIR=lib DOCSDIR="share/doc/molden"  EXAMPLESDIR="share/examples/molden"  DATADIR="share/molden"  WWWDIR="www/molden"  ETCDIR="etc/molden"
--End PLIST_SUB--

--SUB_LIST--
PREFIX=/usr/local LOCALBASE=/usr/local  DATADIR=/usr/local/share/molden DOCSDIR=/usr/local/share/doc/molden EXAMPLESDIR=/usr/local/share/examples/molden  WWWDIR=/usr/local/www/molden ETCDIR=/usr/local/etc/molden
--End SUB_LIST--

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=======================<phase: check-sanity   >============================
===>  License Molden accepted by the user
===========================================================================
=======================<phase: pkg-depends    >============================
===>   molden-6.7,1 depends on file: /usr/local/sbin/pkg - not found
===>   Installing existing package /packages/All/pkg-1.17.5_1.pkg
[main-i386-default-job-02] Installing pkg-1.17.5_1...
[main-i386-default-job-02] Extracting pkg-1.17.5_1: .......... done
===>   molden-6.7,1 depends on file: /usr/local/sbin/pkg - found
===>   Returning to build of molden-6.7,1
===========================================================================
=======================<phase: fetch-depends  >============================
===========================================================================
=======================<phase: fetch          >============================
===>  License Molden accepted by the user
===> Fetching all distfiles required by molden-6.7,1 for building
===========================================================================
=======================<phase: checksum       >============================
===>  License Molden accepted by the user
===> Fetching all distfiles required by molden-6.7,1 for building
=> SHA256 Checksum OK for molden6.7.tar.gz.
===========================================================================
=======================<phase: extract-depends>============================
===========================================================================
=======================<phase: extract        >============================
===>  License Molden accepted by the user
===> Fetching all distfiles required by molden-6.7,1 for building
===>  Extracting for molden-6.7,1
=> SHA256 Checksum OK for molden6.7.tar.gz.
===========================================================================
=======================<phase: patch-depends  >============================
===========================================================================
=======================<phase: patch          >============================
===>  Patching for molden-6.7,1
===========================================================================
=======================<phase: build-depends  >============================
===>   molden-6.7,1 depends on executable: makedepend - not found
<snip>
                    ^
src/xwin.c:79653:34: warning: implicit declaration of function 'isANY' is invalid in C99 [-Wimplicit-function-declaration]
    if (xyzp->ianz[iat] != 7 || !isANY(xyzp->ityp[iat],N2ar,2)) return 0;
                                 ^
src/xwin.c:79685:34: warning: implicit declaration of function 'isANY' is invalid in C99 [-Wimplicit-function-declaration]
    if (xyzp->ianz[iat] != 7 || !isANY(xyzp->ityp[iat],Nany,7)) return 0;
                                 ^
src/xwin.c:79835:9: warning: implicit declaration of function 'isANY' is invalid in C99 [-Wimplicit-function-declaration]
           if (isANY(xyzp->ianz[la-1],GrpR,6)) {
               ^
src/xwin.c:79857:6: warning: implicit declaration of function 'isANY' is invalid in C99 [-Wimplicit-function-declaration]
        if (isANY(C->ityp[iring[i]],C2ar,2)) {
            ^
src/xwin.c:81791:10: warning: implicit declaration of function 'Find_Lig_Conf' is invalid in C99 [-Wimplicit-function-declaration]
                   if (Find_Lig_Conf(conf,i)) {
                       ^
src/xwin.c:85179:2: warning: implicit declaration of function 'ringd_' is invalid in C99 [-Wimplicit-function-declaration]
        ringd_(&i1,iring,&nring,&ZERO,
        ^
src/xwin.c:85264:2: warning: implicit declaration of function 'ringd_' is invalid in C99 [-Wimplicit-function-declaration]
        ringd_(&i1,iring,&nring,&ZERO,
        ^
src/xwin.c:86426:2: warning: implicit declaration of function 'ispnd_' is invalid in C99 [-Wimplicit-function-declaration]
        ispnd_(&irs,&i1,&irng,&ONE,&ZERO,
        ^
src/xwin.c:86970:4: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
   filop_(&SEVENTYSEVEN,&ONE,&ZERO,&ZERO,&ierr);
   ^
src/xwin.c:86989:2: warning: implicit declaration of function 'rdmod_' is invalid in C99 [-Wimplicit-function-declaration]
        rdmod_(&ZERO,&ZERO,&ZERO,&istat,
        ^
src/xwin.c:87032:2: warning: implicit declaration of function 'outmod_' is invalid in C99 [-Wimplicit-function-declaration]
        outmod_(&SEVENTYSEVEN,
        ^
src/xwin.c:87043:2: warning: implicit declaration of function 'sdfsep_' is invalid in C99 [-Wimplicit-function-declaration]
        sdfsep_(&SEVENTYSEVEN);
        ^
src/xwin.c:87073:4: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
   filclo_(&SEVENTYSEVEN);
   ^
src/xwin.c:87397:4: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
   filop_(&SEVENTYSEVEN,&ONE,&ZERO,&ZERO,&ierr);
   ^
src/xwin.c:87416:2: warning: implicit declaration of function 'getmod_' is invalid in C99 [-Wimplicit-function-declaration]
        getmod_(&igtmo,&ZERO,
        ^
src/xwin.c:87450:5: warning: implicit declaration of function 'ispnd_' is invalid in C99 [-Wimplicit-function-declaration]
           ispnd_(&irs,&i1,&irng,&ONE,&ONE,
           ^
src/xwin.c:87476:2: warning: implicit declaration of function 'calgad_' is invalid in C99 [-Wimplicit-function-declaration]
        calgad_(&iasel,&ZERO,&istat,
        ^
src/xwin.c:87488:2: warning: implicit declaration of function 'wrmod_' is invalid in C99 [-Wimplicit-function-declaration]
        wrmod_(&SEVENTYSEVEN,
        ^
src/xwin.c:87519:4: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
   filclo_(&SEVENTYSEVEN);
   ^
src/xwin.c:87681:2: warning: implicit declaration of function 'getmod_' is invalid in C99 [-Wimplicit-function-declaration]
        getmod_(&igtmo,&iadd,
        ^
src/xwin.c:87723:5: warning: implicit declaration of function 'ispnd_' is invalid in C99 [-Wimplicit-function-declaration]
           ispnd_(&irs,&i1,&irng,&ONE,&ONE,
           ^
src/xwin.c:87750:2: warning: implicit declaration of function 'calgad_' is invalid in C99 [-Wimplicit-function-declaration]
        calgad_(&iasel,&ZERO,&istat,
        ^
src/xwin.c:87765:2: warning: implicit declaration of function 'dotyd_' is invalid in C99 [-Wimplicit-function-declaration]
        dotyd_(&icel,
        ^
src/xwin.c:87833:2: warning: implicit declaration of function 'gettnd_' is invalid in C99 [-Wimplicit-function-declaration]
        gettnd_(&igttnk,&ZERO,&ipdbon,&iffset,&iheat,&heat,
        ^
src/xwin.c:87875:5: warning: implicit declaration of function 'ispnd_' is invalid in C99 [-Wimplicit-function-declaration]
           ispnd_(&irs,&i1,&irng,&ONE,&ONE,
           ^
src/xwin.c:91637:3: warning: implicit declaration of function 'cpkeyw_' is invalid in C99 [-Wimplicit-function-declaration]
  cpkeyw_();
  ^
src/xwin.c:91638:3: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
  filop_(&SEVENTYSEVEN,&ONE,&ONE,&ZERO,&ierr);
  ^
src/xwin.c:91654:3: warning: implicit declaration of function 'cubtst_' is invalid in C99 [-Wimplicit-function-declaration]
  cubtst_(&SEVENTYSEVEN,&ijag);
  ^
src/xwin.c:91665:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:91678:3: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
  filclo_(&SEVENTYSEVEN);
  ^
src/xwin.c:91706:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:91913:3: warning: implicit declaration of function 'cpkeyw_' is invalid in C99 [-Wimplicit-function-declaration]
  cpkeyw_();
  ^
src/xwin.c:91914:3: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
  filop_(&SEVENTYSEVEN,&ONE,&ONE,&ZERO,&ierr);
  ^
src/xwin.c:91940:3: warning: implicit declaration of function 'cubtst_' is invalid in C99 [-Wimplicit-function-declaration]
  cubtst_(&SEVENTYSEVEN,&ijag);
  ^
src/xwin.c:91951:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:91964:3: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
  filclo_(&SEVENTYSEVEN);
  ^
src/xwin.c:91997:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:92260:3: warning: implicit declaration of function 'cpkeyw_' is invalid in C99 [-Wimplicit-function-declaration]
  cpkeyw_();
  ^
src/xwin.c:92261:3: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
  filop_(&SEVENTYSEVEN,&ONE,&ONE,&ZERO,&ierr);
  ^
src/xwin.c:92287:3: warning: implicit declaration of function 'cubtst_' is invalid in C99 [-Wimplicit-function-declaration]
  cubtst_(&SEVENTYSEVEN,&ijag);
  ^
src/xwin.c:92298:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:92311:3: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
  filclo_(&SEVENTYSEVEN);
  ^
src/xwin.c:92343:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:92546:3: warning: implicit declaration of function 'cpkeyw_' is invalid in C99 [-Wimplicit-function-declaration]
  cpkeyw_();
  ^
src/xwin.c:92547:3: warning: implicit declaration of function 'filop_' is invalid in C99 [-Wimplicit-function-declaration]
  filop_(&SEVENTYSEVEN,&ONE,&ONE,&ZERO,&ierr);
  ^
src/xwin.c:92563:3: warning: implicit declaration of function 'cubtst_' is invalid in C99 [-Wimplicit-function-declaration]
  cubtst_(&SEVENTYSEVEN,&ijag);
  ^
src/xwin.c:92574:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
src/xwin.c:92587:3: warning: implicit declaration of function 'filclo_' is invalid in C99 [-Wimplicit-function-declaration]
  filclo_(&SEVENTYSEVEN);
  ^
src/xwin.c:92615:2: warning: implicit declaration of function 'rdpld_' is invalid in C99 [-Wimplicit-function-declaration]
        rdpld_(&hlpsrf->nps1,&hlpsrf->nps2,&hlpsrf->nps3,&SEVENTYSEVEN,&istat,
        ^
683 warnings generated.
gmake -C src/ambfor FC=gfortran10 LDR="gfortran10 " EXT=""
gmake[2]: Entering directory '/wrkdirs/usr/ports/biology/molden/work/molden6.7/src/ambfor'
gfortran10 -c -g -ffast-math -funroll-loops -o ambfor.o ambfor.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o qvdw.o qvdw.f
cc -c -g  -Wno-implicit-function-declaration -c alloc.c -o alloc.o
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o optimise.o optimise.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o lbfgs.o lbfgs.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o angle.o angle.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o bond.o bond.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o charge.o charge.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o conn.o conn.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o enegrd.o enegrd.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o getinp.o getinp.f
gfortran10 -c -g -ffast-math -funroll-loops -O3  -c -o param.o param.f
param.f:15697:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15697 |       call parptr(2,fdum,fdum,iatoms)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
param.f:15699:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15699 |       call parptr(4,fdum,fdum,mxnat)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
param.f:15700:20:

15694 |       call parptr(0,coo,fdum,idum)
      |                    2
.....
15700 |       call parptr(5,fdum,fdum,iwesc)
      |                    1
Error: Rank mismatch between actual argument at (1) and actual argument at (2) (rank-1 and scalar)
gmake[2]: *** [<builtin>: param.o] Error 1
gmake[2]: Leaving directory '/wrkdirs/usr/ports/biology/molden/work/molden6.7/src/ambfor'
gmake[1]: *** [makefile:309: ambfor/ambfor] Error 2
gmake[1]: *** Waiting for unfinished jobs....
773 warnings generated.
gmake[1]: Leaving directory '/wrkdirs/usr/ports/biology/molden/work/molden6.7'
===> Compilation failed unexpectedly.
Try to set MAKE_JOBS_UNSAFE=yes and rebuild before reporting the failure to
the maintainer.
*** Error code 1

Stop.
make: stopped in /usr/ports/biology/molden